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==LaTeX Math== | ==LaTeX Math== | ||
<pre> | <pre> | ||
Revision as of 07:37, 10 May 2020
MediaWiki Help Pages
Bradleymonk.com .JS
HTML & CSS
Lua Scripting
- Latest Update: Modules still not working < this is a medium-priority TBD when time permits
Adding HTML5 Video to MediaWiki
To embed a youtube video, use the following code:
{{#ev:youtube|tDKUU0SqbSA}}
{{#ev:youtube|tDKUU0SqbSA}}
Extension LinkTitles
- AUTO GENERATED SITE LINKS
require_once( "$IP/extensions/LinkTitles/LinkTitles.php" );
$wgLinkTitlesSmartMode = false; // false = case sensitive
$wgLinkTitlesMinimumTitleLength = 7; // default is 3
$wgLinkTitlesSkipTemplates = true; // skip any text in a {{template|text}}
$wgLinkTitlesFirstOnly = true; // only link the first occurrence
$wgLinkTitlesBlackList = array();
$wgLinkTitlesBlackList[] = 'MediaWiki';
$wgLinkTitlesBlackList[] = 'mediaplayer';
- USE THE __NOAUTOLINKS__ TAG ON A WIKI PAGE TO PREVENT LINKING ON THAT PAGE
__NOAUTOLINKS__
__NOAUTOLINKS__
Template:SlideBox
{{SlideBox|width=80%|float=left|
Header [[Content]] Is Shown
|
Body text is hidden
}}
Header Content Is Shown
Body text is hidden
Customize Editing Toolbar
http://bradleymonk.com/User:Bradley_Monk/common.js http://www.mediawiki.org/wiki/Extension:WikiEditor/Toolbar_customization
- section
- {String} (optional) The name of the section in the WikiEditor. Defaults to 'main'
- id
- {String} (required) Unique id (ie. 'my-button')
- icon
- {String} (recommended) URL to the icon, should be square about 21 to 22px
- label
- {String} (required) Tooltip displayed when hovering button
- insertBefore
- {String} (optional) Wikitext to be inserted before the cursor on-click
- sampleText
- {String} (optional) Text inserted in place of the cursor if no text was selected
- insertAfter
- {String} (optional) Wikitext to be inserted after the cursor on-click
- callback
- {Function} (optional) Called when the button is clicked
- autoSummary
- {mixed} (optional) Null or an Object with the following properties:
- summary: {String} (required) Edit summary that should be used
- position: {String} (optional) 'append', 'prepend' or 'replace'
- delimiter: {String} (optional) delimiter between the (possibly) current summary and the to-be-inserted summary
Syntax Highlighting
The Extension:SyntaxHighlight GeSHi tag displays formatted source code with the <syntaxhighlight> tag.
This extension also adds coloring according to the code language settings. Like the <pre> tags and the <poem> tags, the tags shows the coding exactly as it was typed, preserving white space.
This extension also can create line numbers.
Usage
On the wiki page, you can now use "syntaxhighlight" elements:
<syntaxhighlight lang="php">
<?php
$v = "string"; // sample initialization
?>
html text
<?
echo $v; // end of php code
?>
</syntaxhighlight>
shows:
<?php
$v = "string"; // sample initialization
?>
html text
<?
echo $v; // end of php code
?>
Alternative <source> tag
Before rev:50696, the extension used the tag <source>.
This is still supported, but <syntaxhighlight> avoids conflicts if your source code itself contains <source> (for example XML).
Parameters
lang="??"- Defines what programming language the source code is using. This affects how the extension highlights the source code. See the section "Supported languages" in this page for details of supported languages.
line="GESHI_NORMAL_LINE_NUMBERS|GESHI_FANCY_LINE_NUMBERS"- Type of line numbering to use. If you do not provide this parameter, then lines will not be numbered. Corresponds to enable_line_numbers the flag in GeSHi.
line- Equivalent to
line="GESHI_FANCY_LINE_NUMBERS" line start="??"- Use together with the parameter "line". Define the start number of the line. If you type line start="55", it will start counting at 55, then 56,57,58... and so on. Corresponds to start_line_numbers_at method on GeSHi
highlight="??"- Specifies which line is highlighted. Note that the parameter line start="??" doesn't affect how it counts the lines.
enclose="??"- Specifies what container is used to enclose the source code. Takes values "pre" (default value), "div", "none". Corresponds to set_header_type method on GeSHi. Choosing "div" will cause text to wrap, which is helpful if text is extending off the edge of the screen, causing horizontal scrolling.
strict- Type the name of the parameter to enable the strict mode. Corresponds to enable_strict_mode method on GeSHi.
The effect and usage of these parameters can be consulted in GeSHi's documentation.
Since r22246, you can override the colors using MediaWiki:Geshi.css.
More Usage
When line numbering is added with line, long code lines will be wrapped. See the example below. When text is the selected language, and numbering is used, the behaviour resembles the use of pre tags with numbering and long-line wrapping.
The following example shows how to color an HTML code listing:
<syntaxhighlight lang="html4strict" line start="100" highlight="5" enclose="div"> HTML module goes here... </syntaxhighlight>
A typical result is just:
<!--This is a comment. Comments are not displayed in the browser-->
<table align=center style="background: ivory;color:maroon;font-style:italic;font-family:arial;font-weight:bold;font-size:10pt;">
<tr><th> Heading 1 </th><th> Heading 2 </th></tr>
<tr>
<td style="padding:10px;"> This is cell 1 text </td>
<td style="padding:10px;"> This is cell 2 text </td>
</tr>
</table>Supported languages
These are the languages known by GeSHi that can be used in the lang parameter.
Note that installed GeSHi version (can be revealed by previewing e.g. <syntaxhighlight lang="-"></syntaxhighlight>) might not be the most recent version; see bugzilla:10967 for Wikimedia sites.
The GeSHi sources for each language can be found in VCS on SourceForge. Remember to go and select the version that the MediaWiki installation uses.
Extra features
- Default Source Language
Added in rev:50693.
If the site mainly quotes the source code of a specific programming language, it would be helpful to set a default language.
To do so, add a new variable to LocalSettings.php, just after the require_once line. We set C programming language as an example:
require_once("$IP/extensions/SyntaxHighlight_GeSHi/SyntaxHighlight_GeSHi.php");
$wgSyntaxHighlightDefaultLang = "c";
LaTeX Math
<math> f(x, \mu, \sigma) = \frac{1}{\sigma \sqrt{2\pi} } e^{ -\frac{(x-\mu)^2}{2\sigma^2} } </math>
- TeX and HTML
LIST OF MATH SYMBOLS IN HTML MARKUP
| TeX Syntax (forcing PNG) | TeX Rendering | HTML Syntax | HTML Rendering |
|---|---|---|---|
<math>\alpha</math>
|
{{math|<VAR>α</VAR>}}
|
α | |
<math> f(x) = x^2\,</math>
|
{{math|''f''(<var>x</var>) {{=}} <var>x</var><sup>2</sup>}}
|
f(x) = x2 | |
<math>\sqrt{2}</math>
|
{{math|{{radical|2}}}}
|
√2 | |
<math>\sqrt{1-e^2}</math>
|
{{math|{{radical|1 − ''e''²}}}}
|
√1 − e² |
The codes on the left produce the symbols on the right, but the latter can also be put directly in the wikitext, except for ‘=’.
| Syntax | Rendering |
|---|---|
α β γ δ ε ζ η θ ι κ λ μ ν ξ ο π ρ σ ς τ υ φ χ ψ ω Γ Δ Θ Λ Ξ Π Σ Φ Ψ Ω |
α β γ δ ε ζ η θ ι κ λ μ ν ξ ο π ρ σ ς τ υ φ χ ψ ω Γ Δ Θ Λ Ξ Π Σ Φ Ψ Ω |
∫ ∑ ∏ √ − ± &infty;
≈ ∝ {{=}} ≡ ≠ ≤ ≥
× · ÷ ∂ ′ ″
∇ ‰ ° ∴ Ø ø
∈ ∉
∩ ∪ ⊂ ⊃ ⊆ ⊇
¬ ∧ ∨ ∃ ∀
⇒ ⇔ → ↔ ↑
ℵ - – —
|
∫ ∑ ∏ √ − ± ∞ ≈ ∝ = ≡ ≠ ≤ ≥ × · ÷ ∂ ′ ″ ∇ ‰ ° ∴ Ø ø ∈ ∉ ∩ ∪ ⊂ ⊃ ⊆ ⊇ ¬ ∧ ∨ ∃ ∀ ⇒ ⇔ → ↔ ↑ ℵ - – — |
Image Annoation
<div class="wpImageAnnotatorEnable">
<span class="wpImageAnnotatorPageName" style="display:none;">[[Sandbox]]</span>
<span class="wpImageAnnotatorFullName" style="display:none;">[[Sandbox]]</span>
<div class="wpImageAnnotatorFile">[[File:Foo.png]]</div>
<div style="display:none;"><div><div><!--IMAGE NOTES BELOW -->{{ImageNoteEnd|id=-1}}
</div>
Livelets
To create livelets, wrap any areas of the page in the #live parser-function.
In the following example, a transclusion of the page called Template:MyVerySlowTable has been turned into a livelet:
{{#live: {{MyVerySlowTable}} }}
References and Citations
Using Native Ref Tags
In-text references make it easy to copy the text to another page; on the other hand, they make it hard to read. References containing a lot of data, quotes or elaborate citation templates can make up a significantly larger fraction of the source than the text that will actually be visible. To avoid this, recent versions of the extension allow moving some or all of the references into the <references /> section, to the place where they will actually appear to the reader. Thus,
According to scientists, the Sun is pretty big.<ref name="miller" />
The Moon, however, is not so big.<ref name="smith" />
==Notes==
<references>
<ref name="miller">E. Miller, The Sun, (New York: Academic Press, 2005), 23-5.</ref>
<ref name="smith">R. Smith, "Size of the Moon", Scientific American, 46 (April 1978): 44-6.</ref>
</references>
will have the same output as the first example above, although the numbering and order of the references will not in general be the same.
HTML
Example
<html> <iframe src="http://www.w3schools.com/tags/tag_iframe.asp" height="100" width="400" frameborder="1" seamless="seamless" style="float:left"></iframe> </html>
iFrame Code
iFrame Attributes
| Attribute | Value | Description |
|---|---|---|
| align | left, right, top, middle, bottom | Specifies the alignment of an iframe according to surrounding elements |
| frameborder | 1, 0 | Specifies whether or not to display a border around an iframe |
| height | pixels | Specifies the height of an iframe |
| longdesc | URL | Specifies a page that contains a long description of the content of an iframe |
| marginheight | pixels | Specifies the top and bottom margins of the content of an iframe |
| marginwidth | pixels | Specifies the left and right margins of the content of an iframe |
| name | name | Specifies the name of an iframe |
| sandbox | "", allow-forms, allow-same-origin, allow-scripts, allow-top-navigation | Enables a set of extra restrictions for the content in the iframe |
| scrolling | yes, no, auto | Specifies whether or not to display scrollbars in an iframe |
| seamless | seamless | Specifies that the iframe should look like it is a part of the containing document |
| src | URL | Specifies the address of the document to embed in the iframe |
| srcdoc | HTML_code | Specifies the HTML content of the page to show in the iframe |
| width | pixels | Specifies the width of an iframe |
Tables
wikitable
| Link | Description |
|---|---|
| BioNetGen | A web-based tool for automatically generating a biochemical reaction networks from user-specified rules for biomolecular interactions. |
| B10NUMB3R5 | (BIONUMBERS) A database of useful biological numbers. |
| BioInformatics Services | BioInformatics Services is a biotechnology consulting firm specializing in using computational biology to solve complex biological and data analysis problems. |
| cellmigrationgateway | modeling software |
| CellML | The CellML language is an open standard based on the XML markup language at the University of Auckland and affiliated research groups. |
| CompCell Bio Web | Development site for teaching modules on quantitative cell biology. |
| DOQCS | Quantitative Cellular Signaling (DOQCS) is a repository of models of signaling pathways. |
| E-Cell | A Multi-Algorithm, Multi-Timescale Simulation Software Environment. |
| Gfit | A program for global regression analysis of experimental data. |
| Kitware | Professional Visualization Solutions, Tools and Support. |
| MCell | General Monte Carlo Simulator of Cellular Microphysiology. |
| Minimotif Miner | Application to search for short sequence motifs in Proteins. |
Upgrading MediaWiki
Step 1 - download latest stable version of MediaWiki
Step 2 - determine database credentials from dreamhost
- Get Hostname (e.g.)
- mysql.bradleymonk.com
- Get Database name (e.g.)
- bradleymonk_com
- Get Database User name (e.g.)
- username
- Get Database User pass (e.g.)
- password
Step 3 - back-up existing files and the database
- Go to: mysql.example.com
- Enter db user and password when prompted
- click on db in left panel
- click on the "Export" tab
- check "Save as file"
- click "Go"
Step 4 - FTP the mediawiki.tar.gz file to the /w directory
Step 5 - Unpack the tarball
- Use the console to SSH into the /w directory and unpack tarball
$ssh bradleymonk.com -l username- Change to the /w directory
$tar xvzf mediawiki.tar.gz
- this unpacks into a new folder:
/w/mediawiki
Step 6 - Move files and rename directory
- Copy files from old to new directory
- LocalSettings.php
- logofile.png
- images (or upload) directory
- extension directory
- custom skins
- .htaccess file
- Swap-rename directories
- rename old directory
/w_old - move new directory out of
/w_oldto top level domain - rename new directory to
/w
Step 7 - Run MediaWiki update script
- login with SSH again:
$ssh bradleymonk.com -l username
- change to the
/w/maintenancedirectory - enter:
$php update.php
- If the prompt gives an error like: "you're using php version 2.x mediawiki requires version 3.x"
- try entering these:
$/usr/local/php53/bin/php update.php$/usr/local/php54/bin/php update.php
- Check if the upgrade worked by going to the MediaWiki page "Special Version"
Quoting
| “ | SAN DIEGO -- Money -- does it draw students to their future careers? The answer is no, according to statistics and students at San Diego State University. | ” |
{{cquote|quote goes here}}
MediaWiki Tips
- To remove the arrow icon from external links, navigate to MediaWiki:Common.css and add this line of code
#content a[href ^="http://"].external {background: center right no-repeat; padding-right: 1px;}
Button Template
{{Button|TPB=.5em| Button Text }}
Button Text
Table Map
See here: Table Map
Labeled Section Transclusion
See: Extension:Labeled_Section_Transclusion
Step 1: Mark off sections
Mark off sections in the text using <section></> tags like this:
<section begin=Hayashi_Malinow_2000_Science />
{{Article|Hayashi Malinow|2000|Science • PDF|10731148|Driving AMPA receptors into synapses}}
<section end=Hayashi_Malinow_2000_Science />
Note that this uses two individual markers, rather than normal XML open/close tags, which simplifies nested or overlapping sections. This allows you to insert section tags without worrying about interfering with other sections.
Step 2: Transclude the section
Call the parser function to transclude it, i.e. to transclude a section called chapter1 from a page called Articles:
{{#section:Articles|Hayashi_Malinow_2000_Science}}