ReDiClusData

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• ReDiClus
  • ReDiClusData
  • Mean Squared Displacement
• Malinow
• Choquet
• Molecular Methods
  • Quantum Dots
  • Mean Squared Displacement

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ReDiClusData ReDiClusData

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3D Surface Plot

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2D surface plot with PSD areas marked with boxes

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SAP cluster for PSD1, note the size is initially bigger than PSD2

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SAP cluster at PSD2, note the number of SAP molecules expressed at the surface of PSD2 (6x6) is initially less than PSD1.

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PSD1: post synaptic density area "1". This PSD area is 6x6 units (1 unit equals 1 nm). The AMPAR 'red' particle diffusion rate in the PSD areas are scaled as a function of the total SAP expressed at their surface (D.psd = D.ec/SAP). So if the extracellular diffusion rate is 0.3 µm²/s and there are 10 SAP molecules in PSD1, then PSD1 diffusion rate would be D.psd = .3/10 = 0.03 µm²/s which are empirically relevant values.

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